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BIGSdb v1.42.5 has been released. This introduces a new plugin that provides a wrapper for ReporTree (https://pubmed.ncbi.nlm.nih.gov/37322495/) – a tool for the automated identification of genetic clusters. BIGSdb powers all the databases on PubMLST. https://github.com/kjolley/BIGSdb.
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BIGSdb v1.38.1 has been released. This expands the use of front-end dashboards to summarize individual projects within an isolate database. These are fully customizable by end users and can be specific for individual projects.
In addition, the annotation status for any scheme can now be displayed within a dashboard.
See the BIGSdb v1.38.1 release notes for more details. https://github.com/kjolley
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Choices include a range of categorical and single hue palettes.
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BIGSdb v1.42.5 has been released. This introduces a new plugin that provides a wrapper for ReporTree (https://pubmed.ncbi.nlm.nih.gov/37322495/) – a tool for the automated identification of genetic clusters. BIGSdb powers all the databases…
Choices include a range of categorical and single hue palettes.
Choices include a range of categorical and single hue palettes.
BIGSdb v1.41.2 has been released. This introduces a choice of 26 colour palettes for use on front-end and query dashboards that can be selected by users. BIGSdb powers all the databases on PubMLST.org. https://github.com/kjolley/BIGSdb.
ht…
BIGSdb 1.39.0 has been released. This version introduces assembly submissions, allowing users to submit genome assemblies to add to existing records via the submission system. See https://bigsdb.readthedocs.io/en/latest/submissions.html#as…
We will be updating servers hosting #PubMLST on December 19-20. The service will be unavailable from 07.00 - 14.00 GMT on Monday December 19. We will then be running at reduced capacity on Tuesday December 20 with submissions, updates, and…
The paper that first described the #BIGSdb platform that is used to host the #PubMLST databases has just reached 2000 citations on Google Scholar. https://pubmed.ncbi.nlm.nih.gov/21143983/
BIGSdb v1.38.1 has been released. This expands the use of front-end dashboards to summarize individual projects within an isolate database. These are fully customizable by end users and can be specific for individual projects.
In addition…
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